Kevin, with all due respect, I disagree. With adjustable dies it is possible to clean the thread with out removing any stock. I do it all the time and end up with original fits. Lately, I've been cleaning some nuts, with standard taps, without enlarging the threads. I always put a sheet of paper under the work to catch the debris and check for metal (bright, shiny chips) in among the rust. Were I to find any, I would stop there! When I was working as a model maker, I didn't use the fits specifications. specs were given as merely "Loose or Tight". I have a Slow, progressive gain assembly for an S.E.M. that I had to scrap because it was too loose. It used a 1/4 X 40 thread. Yes, a 1/4 X 40 TPI, .025 per turn. I used a standard tap and an adjustable die. On the next one, I adjusted (opened) the die for a tighter thread , about .002-3 thousandths and it was perfect. With Mod A threads, I would open it all the way to start and close it little by little.
Terry