Check out this thread:...If you have the cheaper repro muffler, the pipe needs to be bent for a good fit, and the flange needs to be expanded. You can have a muffler shop expand the flange...
Im not sure about an A, but with the B, with the angled exhaust manifold, I find it works better to put a jack bottle under the exhaust pipe, and push it into place before tightening the clamp. Those clamps are not great at pulling the pipe up tight to the manifold, as they tend to bind as they are tightened.