Rainy in Michigan, what a surprise! After a bit, I'll be jumping into my pool here in Sunny California! (gotta rub it in). On the pin, I'd advise you to get a new one. One end is mushroom, the other end is peened. While re-use is certainly possible, it's the cheapest part you'll buy, while having a high dollar potential damage to the driveline if it fails.
It never occurred to me to recheck the pinion bearing preload. Not a bad idea, good on ya. Ford literature on that procedure is sadly lacking in real world experience. The following is much easier and frankly, more consistently accurate: Having only the banjo with pinion assembled, it is positioned pinion shaft down in a bench vise, locked tightly by the pinion shaft. With both hands, spin the banjo strong and fast as you can. Correct preload will prevent free spin, stopping the banjo at no more than one full revolution.
While handling the banjo and housings, it is easy to nick the mating surfaces, creating burrs. These must be dressed down with a file. Take care to not file beyond flush. Do not chase threads on banjo or bolts, as they are correct with interference fitting. Obtain two sets of housing gaskets, the first set to be modified for quick positioning-repositioning between left and right sides by splitting the full circles, and opening the bolt holes. Housings will then remain assembled, merely loosened to allow trading of the (tool) gaskets. If done with care, these gaskets become a valuable time saver in gaging backlash, while the actual gaskets remain pristine. Final assembly will require thread sealer, after which the remaining sealer squish on the outside can be easily removed before it sets up.